This post is a bit of an after the event one!<\/p>\n\n\n\n
podman run -it ubi8\/ubi<\/p>\n\n\n\n
yum update<\/p>\n\n\n\n
yum group install “Development Tools”<\/p>\n\n\n\n
yum clean all<\/p>\n\n\n\n
cat <<EOF > \/etc\/yum.repos.d\/conda.repo \n[conda]\nname=Conda \nbaseurl=https:\/\/repo.anaconda.com\/pkgs\/misc\/rpmrepo\/conda\nenabled=1 \ngpgcheck=1 \ngpgkey=https:\/\/repo.anaconda.com\/pkgs\/misc\/gpgkeys\/anaconda.asc \nEOF <\/pre>\n\n\n\nyum update<\/p>\n\n\n\n
yum install conda<\/p>\n\n\n\n
yum clean all<\/p>\n\n\n\n
source \/opt\/conda\/etc\/profile.d\/conda.sh\nconda -V \n\n# conda update -n base -c defaults conda <not working with rhel8.1 yet, suspect python\/gcc issue\n\nconda config --add channels defaults\nconda config --add channels bioconda\nconda config --add channels conda-forge\nconda create -n <environment name>\n\nMy default image is called conda-4-7-10 and available at quay.io<\/pre>\n\n\n\nOk updated to 4-8-4 and we have rid of the dodgy asc gpg issue, image should be up later. Should be good to pull packages after this into the container<\/p>\n\n\n\n
podman push – move the container image to quay.io<\/p>\n\n\n\n
podman login quay.io<\/p>\n\n\n\n
username<\/p>\n\n\n\n
password<\/p>\n\n\n\n
podman push quay.io\/<user>\/<repo>\/<name><\/p>\n\n\n\n
<\/p>\n","protected":false},"excerpt":{"rendered":"
This post is a bit of an after the event one! podman run -it ubi8\/ubi yum update yum group install “Development Tools” yum clean all cat <<EOF > \/etc\/yum.repos.d\/conda.repo [conda] name=Conda baseurl=https:\/\/repo.anaconda.com\/pkgs\/misc\/rpmrepo\/conda enabled=1 gpgcheck=1 gpgkey=https:\/\/repo.anaconda.com\/pkgs\/misc\/gpgkeys\/anaconda.asc EOF yum update yum install conda yum clean all source \/opt\/conda\/etc\/profile.d\/conda.sh conda -V # conda update -n base -c defaults […]<\/a><\/p>\n","protected":false},"author":4848,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[1],"tags":[],"class_list":["post-1531","post","type-post","status-publish","format-standard","hentry","category-uncategorized","category-1-id","post-seq-1","post-parity-odd","meta-position-corners","fix"],"_links":{"self":[{"href":"https:\/\/blogs.ncl.ac.uk\/igmit\/index.php?rest_route=\/wp\/v2\/posts\/1531","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/blogs.ncl.ac.uk\/igmit\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/blogs.ncl.ac.uk\/igmit\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/blogs.ncl.ac.uk\/igmit\/index.php?rest_route=\/wp\/v2\/users\/4848"}],"replies":[{"embeddable":true,"href":"https:\/\/blogs.ncl.ac.uk\/igmit\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=1531"}],"version-history":[{"count":5,"href":"https:\/\/blogs.ncl.ac.uk\/igmit\/index.php?rest_route=\/wp\/v2\/posts\/1531\/revisions"}],"predecessor-version":[{"id":1552,"href":"https:\/\/blogs.ncl.ac.uk\/igmit\/index.php?rest_route=\/wp\/v2\/posts\/1531\/revisions\/1552"}],"wp:attachment":[{"href":"https:\/\/blogs.ncl.ac.uk\/igmit\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=1531"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/blogs.ncl.ac.uk\/igmit\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=1531"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/blogs.ncl.ac.uk\/igmit\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=1531"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}