Day 7 – Water water everywhere and not a drop to drink – 50nm S of South Georgia

First blood to the chemists! Late this afternoon the rather uncharismatically named CTD took a trip to 3000m. Pressure at this depth is phenomenal, squeezing any air into a space about 1/300th of that it would occupy on the surface. Take a good football down to that depth and it would look flat. There would not be enough air in it to fill a ping-pong ball yet none of the air escaped.

The CTD derives its name from the information it gathers. In days of old the core readings taken by the CTD were Conductivity[salinity], Temperature and Depth[pressure]), today’s kit does so much more. The top section of the equipment houses a rack of 24 water sampling bottles (niskin bottles). They are open tubes with spring loaded ends. Water just flows through the tubes as the CTD sinks until we “fire” the bottles at the target depth. The ends then close capturing a sample of water from a very specific depth. We can fire any number of the bottles at a time. Today it was 4 bottles at each of 6 different depths

Alfred taking a water sample

24 grey bottles handing on the CDT... and if one grey bottle should accidentally fall ....

The bottom section of the CTD houses the instruments. They can be seen more clearly in the third photo below where the bottles were removed for a second dip. In addition to C,T and D we also have a light scattering sensor that measures the number of particles in the water and an Eh metre. The whole package gives quite a detailed picture of the character of the water.

Guiding the rather naked looking CTD over the side without its bottles

Water has a chemical finger print based on temperature salinity and so on. Generally speaking warm and fresh waters float on top of cold and salt water creating different water layers (different combinations of these are more challenging). These layers can flow in different directions and have come from different places. Understanding the structure of the water column is important for example in knowing how heat from the sun is distributed around the earth creating a more uniformly heated planet than would otherwise occur.

However, that is not why we are here. We are searching for hydrothermal vents and they spew out masses of super-hot water with lots of chemicals in it [more on these in the future]. The effect is like smoke from a chimney rising into the sea and floating off on an aquatic breeze. Soon we will go searching for that smoke plume. But first we need to know what is a normal background water finger print for the area before we can trace the abnormal to its source. That was today’s task…completed successfully. As the sun began to set the chemists retreated to their labs, like little children with presents at Christmas, to start analyzing gasses, several nutrients and metals.

Putting up a brave front in the face of all this chemistry was a lone microbiologist, Anni, who is collecting and then filtering water to analyses what bacteria are growing in the water. Watch this space as microbes are the key to the fantastic life to be found at hydrothermal vents.

Anni filtering water for bacteria...hubble bubble ...

Chris

George the chief engineer and fellow Scot with the author expressing sympathy that while I enjoy the crisp outdoors (air temp -0.3, sea temp +1.2) he can toast himself in the engine room.

Day 6 – Pumpkin and Onion Soup – 55 deg 09.9 S, 41 deg 48.6 W

The tension mounts. We have plans and time tables. In less than 12 hours the first samples will be coming over the side. Admittedly they are “background water”, water taken well clear of any influence of the hydrothermal vents we are slowly steaming towards. Not that that matters. The kit is going in and samples should come back.

But that is in the future.

What I want to do today is turn my hand to becoming a food critic. Not sure where I’m going? Read on!. Life aboard ship can be a bit odd and with the right group, a real community spirit develops. After all as the saying goes “we are all in the same boat together”. So we have a good crack and the banter flows. The problem is it usually flows at me. Fine I’ll take give as good as I get. However, I was faced yesterday with a comment I had no comeback too!  “All your write about is food” Ok they exaggerate a bit surely

Day 1 cooked breakfast, cooked lunch, chocolate, coffee and cocktails

Day 2 Steak and Curry

Day 3 Excuses for over eating

Day 4/5 Breakfast for tea and the need for exercise

So perhaps they do not exaggerate. However until the science really kicks off in less than 12 hours I’ll use this blog space to put to rest the minds of all those family. The mums, dads, husbands, wives and partners of all forms. They look after us here on the boat! They even keep track that you are turning up for dinner. Not eating is the first sign of something being wrong with a person…as the safety brief on day 1 hammers home.

So who do we blame / praise (delete as appropriate at end of cruise depending on weight gain)? John and Wally our chefs along with Graham and Stephanie the stewards (who managed to miss the photo opportunity) are who. Molly the ships doc has even chipped in in the kitchen…must have been a good health day. I hope to introduce you to more of the characters aboard as we go ….but given our theme its best to start here.

John and Wally, the guys responsible for the preservation of our taste buds

And for your gastronomic delight! Menu for the 6th Dec. An example of only one form many. The challenge it keeping it going right the way through the cruise. There are usually bets as to when the fresh fruit becomes a choice of bruised apple or a nectarine that escaped from the box. But until then enjoy…

BREAKFAST @ 07:20

Fruit Juices

 Fresh Fruit (mango, kiwi, watermelon, strawberries, cherries, grapes and apples today)

Selection of Cereals (I’ve not touched yet)

Porridge

Cooked Breakfast (sausage, bacon, hash brown, black pudding, tomatoes and eggs today)

Tea, Coffee Toast and Preserves

******

LUNCH @ 11:30 (or not in my case)

Home made pumpkin and onion soup (Delish, I had it for my 03:00 snack)

Salmon fish cakes with dill sauce

Baked jacket potato

Mange-tout

Assorted cold cuts and salad (a wide range…my 00:01 snack)

Ice cream

Fresh baked rolls and assorted cheese and biscuits (my 09:00 snack)

Fresh Fruit

******

DINNER @ 17:30

Home made pumpkin and onion soup

Deep fried scampi with tartar sauce

Beef Casserole with suet dumplings

Creamed potatoes, buttered cabbage, broccoli and cauliflower florets

Assorted cold cuts and salad

Fresh strawberry cheesecake (urm…a second 00:01 snack)

Selection of Ice cream and wafers

Fresh baked rolls and assorted cheese and biscuits

Fresh Fruit

 

Is that the treadmill calling?

Chris

Day 4/5 – The Marie Celeste – 54 deg 45.3 S, 47 deg 47.7 W

First of all a hang over from the last blog entry on orange onesies. In case you wanted a laugh over your coffee here is a video I volunteered to take of Clare putting on the survival suit. Holding the camera opted me out of making a fool of myself. One size truly does fit all.

http://www.youtube.com/watch?v=eMnjzLyTBIU&feature=youtu.be

So I’m slowly equilibrating myself to the night watch. As watch leader I’ll ultimately have responsibility of making sure the work is done to schedule (crushing responsibility at £2000 an hour cruise and ROV time (ROV = remotely operated vehicle…pronounced as a word to those in the know rather than a series of letters…get used to the acronym it will appear a lot in the future))…but until work really begins the 22:00-04:00 watch is a lonely place, four stalwart scientists wondering empty halls (hence the Marie Celeste),  thermo mugs in hand trying to convince the mind that it can be productive at ridiculous o’clock. Sporadic entertainment is to be had when the ship crew change watch at midnight but that doesn’t last long. Broadly speaking we’ve attempted to make Dolly Parton turn in her as yet undug grave as we “sleep 9 to 5….what a way to make a living”, except this is a ship so its 09:00 to 17:00 which makes the rhyming even worse.

What is the point of a port hole cabin when you have to dog it (put the metal flap down and bolt it) to stop the light?

But I digress. So it is breakfast for tea, tea for breakfast and microwave reheated lunch. You think that is confusing try having a conversation about what happened yesterday. Time is apparently relative, only it’s relative to when you slept and someone’s yesterday is usually the night watch’s today. Does that mean they are from the future? Really shouldn’t write blogs this early …I witter (now I know where my son gets it from).

Another few random events…ice update…southern sites still covered but clearing slowly so there is hope!

Currently wishing we had an ice breaker...where is global warming when you need it. Warning positions and routes for illustration purposes. Not to be used for navigation.

For once, the first thing to go over the side was not someone’s lunch (weather has been good) but 3km of ROV umbilical cable. Add one weight, deposit over the end and stream behind the vessel. The purpose is to take any twists out of the cable that develop through use. Too many twists break the important wires inside the cable.

Also a few life patterns are developing. Most of the night watch heads to the gym at 04:00 for an hour or so. Part a drive to keep the metabolism going until after breakfast (our Tea) part effort to fight the potential 7 courses of food in a day when the furthest you can move is a little less than 100m.

Finally I just want to round up with an apology to friends and family. This time the web addresses will be correct! For everyone reading this if you fancy another perspective may I direct you to other bloggers on the cruise.

https://elgg.leeds.ac.uk/geocwo/weblog/

http://picturingthe deep.blogspot.co.uk/

Oh and if you have questions or photo requests you can post them here too or e-mail me!

Chris

Day 3 – Bright orange onesies – South Atlantic SW of the Falkland Islands

Today has been very much a regular day at the office. Granted the office is rather unusual. The first detailed plans are out and its regular work (paper writing, grant proposals and tea drinking) until the 08:00 on the 5th when we test the remotely operated vehicle (ROV). Until then we just keep steaming.  But that is the future. Today at the office was punctuated by compulsory safety drills. Muster stations, life boat drill and putting on an immersion suit. Given that the seawater in which we are currently sailing is a balmy 6 degrees Celsius thermal protection in an emergency is a must. It is all the more important given that in the next 2 days we cross a water boundary and hit the Antarctic water sitting at close to 0 degrees Celsius.

Molly, Leigh and Katrin (50% of the scientists are female and we have lassies amongst the officers, engineers and crew), wrapped up warmly and huddling in the enclosed lifeboat avidly listening to how even hardened sea goers will throw up in one of these. I also learned we are human ballast and our body weight low in the boat is part of the life boat’s self-righting mechanism in the event of capsize. I now have an excuse to over eat!

Thermal protection comes in the form of a bright orange onesie which is accessorized with fetching reflective strips, rubber gloves and mittens. It is one size fits all and tops even my inadequate sense of fashion. Take a look

Oh yes! Fantastic Jeff

Day 2 – The waiting place – Strait of Magellan, Chile

Oh, the Places You’ll Go! by Dr. Seuss

Congratulations!
Today is your day.
You’re off to Great Places!
You’re off and away!

Just a short one for today as not too much has happened. We are officially in the waiting place. The first leg of our journey is a relatively short one up the coast to take on fuel (called bunkering after the days of filling your coal bunkers). The vessel’s fuel tank is not exactly small. We bunkered about 300 tonnes of fuel and that wasn’t to the top. Now that we are officially at sea, meal times have changed to better accommodate the watches. Breakfast and lunch start earlier and run longer. Dinner starts later and was a huge hunk of steak (had curry last night). Most of the day has been spend at a loose end. I’m

 

headed, I fear, toward a most useless place.
The Waiting Place…

…for people just waiting.
Waiting for a train to go
or a bus to come, or a plane to go
or the mail to come, or the rain to go
or the phone to ring, or the snow to snow
or waiting around for a Yes or a No
or waiting for their hair to grow.
Everyone is just waiting.

 

Jobs are all done, we held the initial science meetings for early planning, and the novelty of boat life prevented any serious attempt at work, although I get my computer integrated into the ships systems. Running off a satellite communications link we have what is effectively one broadband connection to cater for all 54 souls on board. While I write this blog on my laptop at my cabin desk I’ll need to transfer the file to one of only three unrestricted internet linked computers. I can only read my e-mail, keep abreast of weather and explore the NHS or order machine parts from my desk access rights…but that’s it. No social media for me and you can forget skype.

"Fill her up?"

Bunkering was completed early afternoon but we waited for the tide to turn before departure as we are heading through a narrows in the Strait. We are not waiting for water depth but for the current. We can either choose to burn fuel and fight it or wait a bit and ride with the current after the tide turns. The captain chose the latter so we finally leave the waiting place at 17:30 and as I write this at just shy of midnight we are shooting out of the Straits of Magellan and being propelled into the South Atlantic with a boost of 2-3 knots for the current.

The first part of my surprise advent / Christmas survival presents from my family. Yes officer I packed my bags myself and no one has asked me to carry anything…

Day 1 – On the burden of distance – Punta Arenas Port, Chile

It’s a long way to the southern tip of Chile. After a little over 35 hours of travel, 0 hours of sleep and 5 in flight movies here we are. This is my third and the final cruise in this research project and the journey is now a familiar one… as is the boat (after this cruise I’ll have totted up 18 weeks calling the Royal Research Ship James Cook home). After only 5 hours sleep and feeling rough, less jet lag and more sleep deprivation, I’m feeling rather crabby. Then again I think the Antarctic would lose something if it was too accessible …after all, the adventure was a major part of the draw of the job. As a fellow researcher in my office likes to say “take a concrete pill and harden up”.

Home for the next 5 weeks. Image taken from ship-technology.com because I don't have a wide angle lens and stepping back to get a good photo would get me very wet

The day rapidly got better when reunited with old ship mates followed by a cooked breakfast. Morning is filled by various rather dull jobs and admin. Unpacking the 6 crates of kit is just one of those and I travel light. Then there is the official signing onto the ship (passports, medical and sea survival certificates please), although I’ll admit the health and safety briefing was somewhat livened by the introduction of anti-piracy procedures and gruesome photos of the serious bodily harm that you can do to yourself with inappropriate use of watertight doors.

Only half of my crates packet back in August and then shipped to Chile for loading…the ideal way to forget what you have already packed. At least I avoided freighting 4 bottles of shampoo this year

After a cooked lunch we head into town to pick up the last minute things including shaving foam (forgot to pack), chocolate (you can never pack enough) and frozen mussels (because customs won’t let me pack). Replacing a coffee pot broken by those lovely scientists on the previous cruise proved more of a challenge. A bit more unpacking and then it was dinner before heading into town for our last opportunity to consume more than 3 units of alcohol. The local cocktail, pisco sours, are exquisite.

Back to the boat by midnight

We cast off at 02:30.

Blog 10: Hydro Buoy, 04/08/2012

Zanzibar Humpback Whale Research Project 2012

Blog 10: Hydro Buoy, 04/08/2012

Although the lighthouse pilot study is completed we are still very busy especially now that Jake Levenson from our funding agency the International Fund for Animal Welfare (IFAW) has arrived. The team is excited, not only to enjoy Jake’s company, but also because he brought with him an additional tool for the humpback whale research – a recording hydrophone buoy (underwater microphone). The hydrophone will be used for nearly continuous acoustic recordings of all underwater sounds including dolphins, whales, vessel activities and any other sounds occurring in the waters in our study area off southern Zanzibar.

 

 Jake Levenson preparing the hydrophone buoy for deployment.

The hydrophone buoy will remain deployed for the rest of the 2012 season and, once retrieved, will provide the project with additional data on the day-and-night acoustic presence of humpback whales and other underwater sounds. It was an interesting process deploying the hydrophone buoy; we had to decide on a location, to minimise noise from reefs (reefs are noisy places!) and the coastline, where waves crash onto shore. In the end, the hydrophone buoy was deployed in an area commonly used by Indo-Pacific bottlenose dolphins (Tursiops aduncus) and Indo-Pacific humpback dolphins (Sousa chinensis) and also where we previously have recorded humpback whale song. Humpback whales sing on the breeding and mating grounds and it is believed the males do this either to attract females or to express their breeding fitness to other males. With these recordings, in addition to data we collect during boat-based hydrophone recordings, the project will be able to compare humpback whale songs throughout the season and between seasons.

 

Captain Foum on our survey vessel on the way to deploy the hydrophone bouy.

The buoy was anchored to the seafloor at a depth of 13 m and will remain there for approximately 6 weeks until the end of the season. Prior to deployment a sampling rate (times throughout the day it will record acoustic data) was chosen to ensure battery life across the full extent of the deployment period – you would not want to discover that the batteries died halfway through the deployment.

 

Foum preparing the ‘anchor’ which will be used to hold the hydrophone buoy in place.

 

Abas, a local friend & divemaster, who dove with Jake to deploy the hydrophone

Khamis, our local captain, with the hydrophone buoy.

 

Abas post-dive: texting while diving?

Many thanks to Jake for bringing the exciting new piece of equipment to the Zanzibar Humpback Whale Project; the data collected from the hydrophone buoy will help us assess the occurrence and singing behaviour of the whales and other noise including vessel traffic, offshore oil and gas activities, dynamite fishing and other human or natural sounds off southern Zanzibar.

 

Pictures © Zanzibar Humpback Whale Project

Blog 9: A Friendly New Face, 03/08/2012

Zanzibar Humpback Whale Research Project 2012

Blog 9: A Friendly New Face, 03/08/2012

On the 29th of July the team was very happy to welcome a new local student to the Zanzibar Humpback Whale Project. Khamis Khamis is a second year undergraduate student at the University of Dar Es Salaam where he is studying for a Bachelor of Science in Aquatic Environmental Science and Conservation. Khamis is happy to join the Project this year and hopes that this experience will give him further knowledge about the whales around Zanzibar. Karibu Zanzibar Humpback Whale Project, Khamis!

 

Nat, Yussuf, Khamis & Lynne

After an incredibly busy ten days of conducting both lighthouse and boat-based surveys we finished the lighthouse pilot study on Friday the 3rd of August. Overall, the addition of the lighthouse surveys resulted in more logistics for the team; every day we were busy working in sub-teams for boat and lighthouse surveys so had to organize food for both teams, coordinate timing of boat departures and travel by car to Makunduchi, and established new data collection protocols and their related databases. Despite the additional effort the team was very pleased with the data we collected from the Makunduchi lighthouse!

Makunduchi, on the southeast end of Zanzibar (Unguja) Island, appears to be one of the most popular areas for the whales in our survey area; almost every morning we receive fisher’s reports of whales and we often observe them there while conducting boat-based surveys. It takes about one hour to travel by survey boat from Kizimkazi-Dimbani to Makunduchi and, being more exposed to the open sea of the Indian Ocean, we are often unable to survey in the area due to the less protected, rougher seas that often occur here. The opportunity to conduct land-based surveys at Makunduchi allowed us to collect previously inaccessible data.

 

View from Makunduchi lighthouse looking up the east coast of Zanzibar

 

View looking down from the Makunduchi lighthouse

Over the course of the lighthouse pilot study, whales were seen almost every day and their behaviour and respiration rates could be easily recorded…whale blows are easy to spot when you are viewing an expanse of sea from 44 m above sea level! We collected data on their behaviours and respiration rates and were able to do so in a way similar to our boat behaviour surveys. We could time the surface intervals (times the whales were at the surface breathing between dives) and a variety of behaviours including traveling, resting and socializing. It was spectacular watching huge breaches, often multiple ones, from the lighthouse! One day we had a wonderful observation of one animal doing nine pectoral-fin slaps in just over a minute, just off the shelf edge below the lighthouse! In addition to tracking the whales’ movement we performed boat scans at regular intervals with the intention to collect data on interactions between vessels and whales.

 

Kristin keeping out of the sun while scanning from the lighthouse

By conducting land-based surveys from the lighthouse we could easily track animals in the area and had so much success viewing animals that we had to establish a protocol for tracking multiple groups of whales. We had to decide which, of often many, groups of whales we would track and for how long we would focus on an single group. By the end of the ten day study we had figured out what to do when we had multiple sightings at a time…which was the case most days!

 

Yussuf scanning from the lighthouse

Due to the success of the land based surveys we intend to collect more of this data next year and for the extent of the research season. It will result in a busy season for the team in 2013 but we will surely get some great data to assess the presence of whales, their behaviours, and their interactions with vessels around southern Zanzibar.

Finally, we would like to extend thanks to the community of Makunduchi for allowing us to work at the lighthouse in their village. Without their willingness to support this research, data collection from the lighthouse would not be possible!

Photographs © Zanzibar Humpback whale Project

Blog 8: Sounding of the Whales 23/07/2012

Zanzibar Humpback Whale Research Project 2012

Distinct and beautiful songs of the male humpback whales have been making waves in Zanzibar and our research team has been able to take full advantage with some lengthy recordings using a specialised hydrophone to allow for the low frequency sounds to be picked up.

The preliminary results have been very encouraging with the majority of the songs being visible in the analysis.

When the team analyse the songs we use a specialised bioacoustics program. This allows for the song to be viewed on a graph, a spectrogram. Humpback whale songs are relatively complex but they have distinctive patterns that may be used for analysis. Each song is about 20-30 minutes long but may be repeated for several hours. The song is divided into different sections, the largest being themes. These themes can then be further broken down to smaller fragments called phrases and units.

The organisation and structure of the songs is of particular interest to Nat Stephenson (research assistant and Newcastle undergraduate student) who will be analysing the recordings for his dissertation project. Nat will be comparing the songs from this year to recordings from previous years to look for changes within season and also changes over a greater temporal span.

The songs are seen as a crucial ingredient in the mating behaviour of humpback whales and we hope that the song analysis in combination with all other data we are collecting will give us further understanding about the humpback whales off east Africa.

Nat and Kristin deploying the hydrophone to record humpback whale song.


Example of humpback whale song (dark wiggles) as shown in a spectrogram.

Photographs © Zanzibar Humpback whale Project

Blog 7: Risso’s Dolphin Necropsy 21/07/2012

Zanzibar Humpback Whale Research Project 2012

Blog 7: Risso’s Dolphin Necropsy 21/07/2012

Saturday the 21st of July was the start of Ramadhan in Zanzibar which, coupled with a rough sea, resulted in the project team enjoying a quiet day off. We used this precious down-time to get some computer based project work done and to do some washing. After a fairly relaxing morning, the team received a call from Pandu (one of our local contacts) who informed us a by-caught dolphin had been landed in our neighbouring village, Kizimkazi-Mkunguni. After quick preparations to bring the necropsy kit and data forms together we were driven straight to Mkunguni to take photos and collect samples from the dolphin.

The “dolphin” found by fishermen from Kizimkazi-Mkunguni

The “dolphin” found by fishermen from Kizimkazi-Mkunguni

 However, when we arrived, to our surprise we discovered it wasn’t a bottlenose or humpback dolphin but a species we don’t normally see in the waters around southern Zanzibar. We were relieved when we found out the fishers found it dead and floating in the water meaning it was not another by-caught dolphin. At first glance, Kyla thought it might be a pygmy killer whale (Feresa attenuata) or melon-headed whale (Peponocephala electra) based on the body size, shape and colouration but we were baffled as some features, such as the very tall dorsal fin and the teeth (or lack thereof!) didn’t seem right. Of course, after sending photos to the project leader Dr Per Berggrenat Newcastle, he suggested it might be a Risso’s dolphin calf; Risso’s dolphins (Grampus griseus) are very scratched resulting in a greyish colouration but a calf/juvenile is still quite dark and Risso’s dolphins have very few teeth.

 Kristin and Kyla looking for the teeth…and only finding two tiny ones at the front!

Kristin and Kyla looking for the teeth…and only finding two tiny ones at the front!

 As soon as we arrived at the fish market at the beach in Mkunguni we started taking photos, measurements and collected tissue samples of the dolphin. As mentioned above, no teeth could be seen initially; we thought it might be an older animal with very worn teeth, but on close inspection we found two very small teeth at the front of the jaw. So, a section of the jaw bone with the two teeth was removed as a sample. The cause of death was not identifiable as there were no external signs such as lacerations, or injury from fishing gear, however, the animal looked under nourished. We were not able to conduct a complete necropsy on the animal but we collected the stomach contents for possible dietary analyses.

 Yunusu, a friend of the project, helping us collect samples

Yunusu, a friend of the project, helping us collect samples

Members of the research team checking out the Risso’s calf with fishers from Mkunguni watching with curiosity.

Members of the research team checking out the Risso’s calf with fishers from Mkunguni watching with curiosity.

One thing we didn’t think about when we collected the bucket of guts to take back with us was the smell we’d have to endure on the drive back to Kizimkazi-Dimbani! We ended up driving the entire way with back of the car open, much to the amusement of all the locals. All in all, it was a very unexpected but interesting day!

Photographs © Zanzibar Humpback whale Project