The wonderful world of Microbiology

Ever wondered what goes on in the Newcastle University Biomedical Sciences labs behind the scenes? On Wednesday 28th February, researchers from the school of Biosciences, Nutritional and Sports Sciences organised a Microbiology research fair to give students a sneak peak into the fascinating world of microbiology research, PhDs, careers, summer placements and final year projects. There were also amazing opportunities to go and see the research laboratories and facilities on the lab tours. So I couldn’t resist tagging along to see what was going on – and let me tell you, it didn’t disappoint! From chatting with researchers deep in ground-breaking projects to getting a first hand look at cutting-edge equipment, there was so much to discover.

Students were talked through different research at each station

There were many areas of research, but one big topic that caught my attention was the gut microbiome. Even though this research fair was mainly aimed at Biosciences students, it was interesting as a student dietitian myself to see the vast amount of research that the University is conducting on this area, as it is a really new and exciting area in the advancing field of nutrition. Some PhD students were researching into how fibre is broken down in the gut by different strains of gut bacteria and how the body uses these chemicals that are produced. One student was focussing particularly on how caramelised sugars are digested by the gut microbiome, and even though excess sugars are seen to have harmful effects on health, some gut bacteria can break these down to useful chemicals!

One of the most interesting stations for me was the station that was showing a machine taking species from the sea to make antibiotics. A remote machine goes down 4000m deep in the South Pacific and takes samples from the bottom of the ocean. It was fascinating how intricate the collection process was, yet how simply the machine could extract the sediment. These samples are then transported back to the labs and the microbes are cultured. The microbes of particular interest to them are Actinomycetes, and these produce 70% of all antibiotics. These actinomycetes have the ability to kill MRSA and other large strains of microbes. These researchers really had a passion for the undiscovered potential of the sea, and it seems like this is a really up and coming area of research.

Here you can see the machine arm working at the bottom of the sea floor to extract the sediment

The most exciting part of the afternoon was the tours of the research labs! From state-of-the-art equipment to cutting-edge facilities, the students got a first hand look at what goes on in the world of research. Our tour leader’s research was focussing on Staphylococcus Aureus. Yes, we are talking about the superbug MRSA – a bacteria that is very complicated as it has the potential to cause lots of different diseases.

Gel electrophoresis equipment in the laboratory
Our fab laboratory tour guide showing us her MRSA superbug cultures

The labs had loads of cool equipment – the second one we were showed around was a biochemistry lab with research focussing on proteins. Their mission is to purify tiny proteins to find the protein of interest, and then grow crystals of it. The coolest machine in the lab by far was the X ray generator, which focuses on the protein crystal. The x ray signal is then amplified and detracts using electron density, which will rotate and shoot as many x rays as possible to collect the data. This helps them to calculate the structure of the molecule with the help of computer software, therefore figuring out what the protein looks like and its function. Ever heard of the lock and key interaction? Well, imagine the protein as the lock and the target molecule as the key. With 3D printing technology, these researchers can create super cool models of the protein structure. And here’s a fun fact to wrap things up – this model below was created of a tyrosine residue. Turns out, it’s not just some fancy scientific term – it’s actually a super important ingredient that can be used in toothpaste to break down plaque in your mouth, showing how important this science research is in everyday life!

The 3D model of tyrosine residues generated by the 3D printer


Biomedical scientists are also actively involved at the Freeman Hospital in researching urinary tract infections (UTIs) through a patient-centred approach, involving collaboration with clinicians ant their patients. This approach emphasizes the importance of understanding the individual needs and experiences of patients in managing and treating UTIs. By working closely with clinicians and patients, these biomedical scientists are contributing to the development of personalized treatment strategies and interventions to improve patients outcomes. They also are conducting laboratory based research to better understand the underlying causes of UTIs, including identification of pathogens, antibiotic resistance patterns and host immune responses to help advance our understanding of them and develop more effective treatment options. This work shows the diverse scope of the Biomedical science profession, which extends beyond traditional lab-based research to the hospitals to use more patient-centred approaches to better improve quality of care.

Judith and Phillip are both active researchers within the Freeman Hospital and with Newcastle University

The research showcased at the fair provided a glimpse into the groundbreaking research happenign at the university in various fields. From the gut microbiome to exploring the potential of the sea for antibiotic discovery, students had so much opportunity to ask questions. The future of science is definitely looking bright!

My IDS Adventure!

By: Ben Gardner

What I thought of the summer placement.

My time at ImmunoDiagnosticSystems (IDS) was extremely valuable and interesting, it was great to see what we learn about at uni being used in real-life.

I learnt many skills in the lab including immunoassays, antibody purification, and accurate working. I have also developed my ability to document labwork, process data, and think critically. It was interesting to see the many different departments IDS has and how they interact. IDS is an excellent company for aspiring bio-scientists with special thanks to Michael Gardner, the rest of the Process Development department, and the Quality Control department. They all really helped me on my placement, and I had a great experience chatting with them in the labs and the office. I would highly recommend other students to take up a placement at IDS and I can guarantee they will have a wonderful time!

Continue reading “My IDS Adventure!”

Spending my summer break in labs in Thailand

By: Cornelia V. Genika BSc Biomedical Sciences

Hi! I am Cita, from Indonesia, and a stage 2 student of Biomedical Sciences, and here I would like to share my experience joining a 10-day science training program in Thailand during the summer break!

Over the summer I joined a science training program ran by Mahidol University in Thailand. I was introduced to this program by my friend, and I decided to join it as I thought this would be a great opportunity for me to develop the lab skills that I have gained throughout the first year and gain new scientific knowledge, meet new people, and build connections, as well as improve my CV.

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Pengalaman Latihan Industri Harith: Daripada Sains Bioperubatan kepada Sains Nutraseutikal

Ditulis oleh Harith Syahmie Zulfikree 

Hi semua! Saya Harith, pelajar tahun satu jurusan Ijazah Sarjana Muda Sains Bioperubatan (Kepujian) dari Malaysia! Dalam blog ini, saya akan berkongsi pengalaman menjalani latihan industri selama 2 bulan semasa cuti musim panas di Institut Pembangunan Bioproduk (IBD), Universiti Teknologi Malaysia (UTM), Johor, Malaysia.   

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Harith’s Internship Experience: From Biomedical Science to Nutraceutical Science

By: Harith Syahmie Zulfikree 

Hi everyone! I’m Harith and I’m a first-year BSc (Hons) Biomedical Sciences student from Malaysia! In this blog post, I will share my 2-month internship experience during my summer break at the Institute of Bioproduct Development (IBD), Universiti Teknologi Malaysia (UTM), Johor, Malaysia.   

Continue reading “Harith’s Internship Experience: From Biomedical Science to Nutraceutical Science”

Clinics, Catering, and Community Settings: Placement Experiences in First Year Dietetics

September 2020 was just around the corner. I was feeling excited but also nervous to begin the journey as a student in the very first cohort of the MDiet course at Newcastle University. Little did I know that COVID-19 was going to change university life as we know it.

The new norm included logging in to different Zoom classes, communicating with classmates via e-mail or texts, and learning how to measure portion sizes from an online live lab. It was all new at first, but our lecturers were always ready to respond to any request we had. What I love the most is that our cohort is quite diverse with different people, ideas and backgrounds coming together to learn, discuss and debate on Nutrition and Dietetics matters. MDiet is a safe place for us to communicate our thoughts and goals.

Continue reading “Clinics, Catering, and Community Settings: Placement Experiences in First Year Dietetics”

My Summer Travels with Cryptosporidium

Rosie, our Biomed undergrad tells you of her experience working in Wales and Liverpool on a summer research placement

By Rosie Gathercole

Working with poo turned out to be exactly the summer experience I wanted!

I worked at the national Cryptosporidium Reference Unit (CRU) at Public Health Wales in Swansea with Professor Rachel Chalmers and her team. I received a Scholarship from the Society for Applied Microbiology (SfAM) for this placement, writing the application together with Rachel.

Rosie with a computer screen behind her showing the live spectra produced by the mass spec machine
Me working on my summer placement

Cryptosporidium is a parasite that causes diarrhoea, is found globally and is typically passed from animals, other people, food and fresh water sources. It is currently a human health issue due to the significant effect it has in developing countries and the lack of specific treatments to fight the parasite. Quite often how well you recover from the illness depends on how healthy you were to begin with!

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Why Study Abroad?

By Dr Carys Watts

Going abroad may be a week’s holiday, or to some it’s going global or for longer, but have you ever thought about studying abroad as part of your Newcastle University degree? You could study abroad for a few weeks or up to an entire year, and it could change your perspective forever.

‘I can honestly say it was the best time of my life’– Eleanor (semester at Monash University, Melbourne)

Did you know you can study language modules for free at Newcastle?

I’m not sure it is for me

So you may think of reasons why not to do it, but there are loads of great reasons to give it a try: Continue reading “Why Study Abroad?”